miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|92444208|gb|EB516342.1|EB516342 CCAAGGCCACGCGGGTGGGCGTGCTTCTCAACTGTGACCACGGCTTTGTCATCTTCTTCGCTGTTGCCGACAGGGTCCAC
CTGATGTATAAGTTCAAGGTGGACTTTACCGAGGCTTTGTACCCGGCTTTCTGGGTGTTTTCTGCTGGTGCCACCCTCTC
CATCTGCTCCCCCAAGTAGGCAGGCTGTAGACACTTGGGCTGACTGCCTGCAGAGGTCCCAAGACCCTAGTGAAAATGCA
GCAGGCAGAACTCTCCTTAGACAATTCCCCAAGAGGTACCAAGGATTGGGAGCATGGGAGGGGAGCTGGTGGGAGGGTGG
GATATGGGATTTAGCCAGGAAAGGGGTGAGGGTGATTGTGTTGTAGGTGAGGAGGCATTTCCACCCCTCGGTGCCTATCA
GGGCAGAGTGACCTGCTCCCCATTGTTCTGGAAATCTCCAGGCTGCTGGGCAGCTGGGCAGAGCTCTGGGGAGTGAAGTC
ATGAGTGCCCGATTCCTCTTAGAGAAAATCCATAGCTACTGTAGGTTCTGTCTTGGGTCACTTGGATCTGAAGGCTGCCC
CTTTGCTCTCTGGGGTAGCCTTCAGATCTTGGTGTTTTGATTACTTGCTATAGATGTTTTTAAAATTCCAAAGTCATTGA
GTTTCAATATTATATAACCTCCATTACCCGCATGTTGGGGCTCAATCTCCTGGTTATTATCTGTGCTTGAGGAAACATCC
ACAGCAGTCTCTCCCCAGAACAGAGTTTCCTAAAGAAGCATGCCCTCTTCTCACTGG




Most similar to sp|Q14258|TRI25_HUMAN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q14258|TRI25_HUMAN E3 ubiquitin/ISG15 ligase TRIM25 OS=Homo
           sapiens GN=TRIM25 PE=1 SV=2
          Length = 630

 Score =  120 bits (302), Expect = 8e-27
 Identities = 56/58 (96%), Positives = 58/58 (100%)
 Frame = +3

Query: 3   KATRVGVLLNCDHGFVIFFAVADRVHLMYKFKVDFTEALYPAFWVFSAGATLSICSPK 176
           KATRVGVLLNCDHGFVIFFAVAD+VHLMYKF+VDFTEALYPAFWVFSAGATLSICSPK
Sbjct: 573 KATRVGVLLNCDHGFVIFFAVADKVHLMYKFRVDFTEALYPAFWVFSAGATLSICSPK 630